Bump the pip group across 1 directory with 3 updates

[dependabot]

Bumps the pip group with 3 updates in the / directory: numpy, scikit-learn and pillow.

Updates numpy from 1.11.1 to 1.22.0

Release notes

Sourced from numpy's releases.

v1.22.0

NumPy 1.22.0 Release Notes

NumPy 1.22.0 is a big release featuring the work of 153 contributors spread over 609 pull requests. There have been many improvements, highlights are:

• Annotations of the main namespace are essentially complete. Upstream is a moving target, so there will likely be further improvements, but the major work is done. This is probably the most user visible enhancement in this release.
• A preliminary version of the proposed Array-API is provided. This is a step in creating a standard collection of functions that can be used across application such as CuPy and JAX.
• NumPy now has a DLPack backend. DLPack provides a common interchange format for array (tensor) data.
• New methods for quantile, percentile, and related functions. The new methods provide a complete set of the methods commonly found in the literature.
• A new configurable allocator for use by downstream projects.

These are in addition to the ongoing work to provide SIMD support for commonly used functions, improvements to F2PY, and better documentation.

The Python versions supported in this release are 3.8-3.10, Python 3.7 has been dropped. Note that 32 bit wheels are only provided for Python 3.8 and 3.9 on Windows, all other wheels are 64 bits on account of Ubuntu, Fedora, and other Linux distributions dropping 32 bit support. All 64 bit wheels are also linked with 64 bit integer OpenBLAS, which should fix the occasional problems encountered by folks using truly huge arrays.

Expired deprecations

Deprecated numeric style dtype strings have been removed

Using the strings "Bytes0", "Datetime64", "Str0", "Uint32", and "Uint64" as a dtype will now raise a TypeError.

(gh-19539)

Expired deprecations for loads, ndfromtxt, and mafromtxt in npyio

numpy.loads was deprecated in v1.15, with the recommendation that users use pickle.loads instead. ndfromtxt and mafromtxt were both deprecated in v1.17 - users should use numpy.genfromtxt instead with the appropriate value for the usemask parameter.

(gh-19615)

... (truncated)

Commits

• 4adc87d Merge pull request #20685 from charris/prepare-for-1.22.0-release
• fd66547 REL: Prepare for the NumPy 1.22.0 release.
• 125304b wip
• c283859 Merge pull request #20682 from charris/backport-20416
• 5399c03 Merge pull request #20681 from charris/backport-20954
• f9c45f8 Merge pull request #20680 from charris/backport-20663
• 794b36f Update armccompiler.py
• d93b14e Update test_public_api.py
• 7662c07 Update init.py
• 311ab52 Update armccompiler.py
• Additional commits viewable in compare view

Updates scikit-learn from 0.17.1 to 1.5.0

Release notes

Sourced from scikit-learn's releases.

Scikit-learn 1.5.0

We're happy to announce the 1.5.0 release.

You can read the release highlights under https://scikit-learn.org/stable/auto_examples/release_highlights/plot_release_highlights_1_5_0.html and the long version of the change log under https://scikit-learn.org/stable/whats_new/v1.5.html

This version supports Python versions 3.9 to 3.12.

You can upgrade with pip as usual:

pip install -U scikit-learn

The conda-forge builds can be installed using:

conda install -c conda-forge scikit-learn

Scikit-learn 1.4.2

We're happy to announce the 1.4.2 release.

This release only includes support for numpy 2.

This version supports Python versions 3.9 to 3.12.

You can upgrade with pip as usual:

pip install -U scikit-learn

Scikit-learn 1.4.1.post1

We're happy to announce the 1.4.1.post1 release.

You can see the changelog here: https://scikit-learn.org/stable/whats_new/v1.4.html#version-1-4-1-post1

This version supports Python versions 3.9 to 3.12.

You can upgrade with pip as usual:

pip install -U scikit-learn

The conda-forge builds can be installed using:

conda install -c conda-forge scikit-learn

... (truncated)

Commits

• b51d0c9 trigger whell builder [cd build]
• 919ae9b MAINT Reoder what's new for 1.5 (#29039)
• 0ac28ad DOC Release highlights 1.5 (#29007)
• 729b54d test py3.12 against numpy 2 [cd build]
• 1e50434 set version
• ffbe4ab DOC remove obsolete SVM example (#27108)
• 4647729 DOC Fix time complexity of MLP (#28592)
• 9bd7047 FIX convergence criterion of MeanShift (#28951)
• b79420f FIX add long long for int32/int64 windows compat in NumPy 2.0 (#29029)
• 37f544d DOC replace pandas with Polars in examples/gaussian_process/plot_gpr_co2.py (...
• Additional commits viewable in compare view

Updates pillow from 3.4.2 to 12.2.0

Release notes

Sourced from pillow's releases.

12.2.0

https://pillow.readthedocs.io/en/stable/releasenotes/12.2.0.html

Documentation

• Update 12.2.0 release notes #9522 [@​hugovk]
• Add loader plugins: AMOS abk, Atari Degas, 40+ more obscure formats via Netpbm #9482 [@​bitplane]
• Update Python versions #9515 [@​radarhere]
• Jeffrey A. Clark -> Jeffrey 'Alex' Clark #9513 [@​aclark4life]
• Add release notes for #9394, #9419 and #9456 #9467 [@​radarhere]
• Add Amiga Workbench .info loader to 3rd party plugins list #9459 [@​bitplane]
• Merge PFM documentation into PPM #9434 [@​radarhere]
• Update macOS tested Pillow versions #9431 [@​radarhere]
• Fix CVE number #9430 [@​hugovk]

Dependencies

• Update xz to 5.8.3 #9523 [@​radarhere]
• Update libjpeg-turbo to 3.1.4.1 #9507 [@​radarhere]
• Update libpng to 1.6.56 #9499 [@​radarhere]
• Update freetype to 2.14.3 #9485 [@​radarhere]
• Updated libavif to 1.4.1 #9479 [@​radarhere]
• Updated harfbuzz to 13.2.1 #9461 [@​radarhere]
• Update Ghostscript to 10.7.0 #9469 [@​radarhere]
• Update harfbuzz to 13.0.1 #9453 [@​radarhere]
• Update libavif to 1.4.0 #9460 [@​radarhere]
• Update freetype to 2.14.2 #9449 [@​radarhere]
• Update actions/download-artifact action to v8 #9451 [@renovate[bot]]
• Updated libpng to 1.6.55 #9425 [@​radarhere]

Testing

• Cleanup .spider extension in the same test where it is added #9517 [@​radarhere]
• Run tests in parallel via tox for 3.5x speedup #9516 [@​hugovk]
• Enable colour in CI logs #9486 [@​hugovk]
• Update Ghostscript to 10.7.0 #9469 [@​radarhere]
• Simplify TGA test code #9477 [@​radarhere]
• Update tests to check for ValueError when encoding an empty image #9464 [@​radarhere]
• Upgrade CI from macos-15-intel to macos-26-intel #9454 [@​hugovk]
• Add check-case-conflict hook #9446 [@​radarhere]
• Specify platform when pulling docker image #9440 [@​radarhere]
• GHA: Cache libavif and webp builds for Ubuntu #9437 [@​hugovk]
• Update macOS tested Pillow versions #9431 [@​radarhere]

Other changes

• Check calloc return value #9527 [@​radarhere]
• Check all allocs in the Arrow tree #9488 [@​wiredfool]
• Reject non-numeric elements inside list coords #9526 [@​hugovk]
• Move variable declaration inside define #9525 [@​radarhere]

... (truncated)

Changelog

Sourced from pillow's changelog.

Changelog (Pillow)

11.1.0 and newer

See GitHub Releases:

• https://github.com/python-pillow/Pillow/releases

11.0.0 (2024-10-15)

• Update licence to MIT-CMU #8460 [hugovk]

• Conditionally define ImageCms type hint to avoid requiring core #8197 [radarhere]

• Support writing LONG8 offsets in AppendingTiffWriter #8417 [radarhere]

• Use ImageFile.MAXBLOCK when saving TIFF images #8461 [radarhere]

• Do not close provided file handles with libtiff when saving #8458 [radarhere]

• Support ImageFilter.BuiltinFilter for I;16* images #8438 [radarhere]

• Use ImagingCore.ptr instead of ImagingCore.id #8341 [homm, radarhere, hugovk]

• Updated EPS mode when opening images without transparency #8281 [Yay295, radarhere]

• Use transparency when combining P frames from APNGs #8443 [radarhere]

• Support all resampling filters when resizing I;16* images #8422 [radarhere]

• Free memory on early return #8413 [radarhere]

• Cast int before potentially exceeding INT_MAX #8402 [radarhere]

... (truncated)

Commits

• 3c41c09 12.2.0 version bump
• cdaa29e Check calloc return value (#9527)
• 585b2f5 Check calloc return value
• ecf011e Check all allocs in the Arrow tree (#9488)
• cf6de8c Reject non-numeric elements inside list coords (#9526)
• ffdcede Update 12.2.0 release notes (#9522)
• 7929d77 Added security release notes (#149)
• c4f7aa5 Added security release notes
• 22cdb5f Move variable declaration inside define (#9525)
• fc15b3b Resize tall images vertically first (#9524)
• Additional commits viewable in compare view

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